John Innes may refer to:
- John Innes (MP) (1767–1838), Scottish merchant and politician
 - John Innes (philanthropist) (1829–1904), English philanthropist
- John Innes Centre, founded by funds bequeathed by Innes
 - John Innes compost, developed by the Centre
 
 - John Innes (Toronto, Ontario politician) (died 1951), Toronto municipal politician
 - John Innes (Gloucester, Ontario politician) (1877–1939)
 - John Brodie Innes (1815–1894), British cleric, John Innes before 1862
 - John de Innes (c. 1370–1414), bishop of Moray
 
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